CDS

Accession Number TCMCG007C36456
gbkey CDS
Protein Id XP_009148916.1
Location complement(join(6125521..6125567,6125638..6126208,6126459..6126540,6126623..6126735,6126894..6127025,6127102..6127285,6127457..6127590,6127781..6127885,6127974..6128075,6128232..6128324,6128396..6128713,6128846..6128947,6129038..6129100,6129252..6129717,6130000..6130154,6130519..6131043,6131122..6131163,6131248..6131379,6131490..6131554,6131629..6131862,6132083..6132155,6132238..6132465))
Gene LOC103872320
GeneID 103872320
Organism Brassica rapa

Protein

Length 1321aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009150668.3
Definition protein TSS isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description Translation initiation factor eIF3 subunit 135
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K03255        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCACCGAGGTCAAGCAAGGGCAAGTCAAACAGAGGGAAAGGAGAGAAGAAGAAGAGAGAAGAGAAAGTGTTGGTTCCAAGTCTGGTTGATATCACAGTCACGACTCCTTACGAAACACAAGTGATACTCAAAGGAGTCTCTACTGACAAGATCATTGATGTGAAAAGGCTTTTAGCATCTCATGTTGACACTTGCCATCTCACCAACTACTCTCTCTCGCATCAAGTGAAAGGGCGTAGATTGAGTGATAGCATCCAAGTGGTTACCCTCAAGCCTTGTGTCCTCCGTATGATTCCAGAGGACTACGTGGAGGAAAGTCAAGCTTTGACTCAGGTGCGGAGAGTCCTAGACATCGTAGCGTGCACCACCAGGTTCTCCTCCGCCTCCAAATCTTCTTCCAACAAACTCGTCGCCGTCGGAAATGGCAATCCGGCGCCGGAGGGACTGGACATGGTCGCTATCCACCCGACGCCTAAGCTCTCTCAATTTTACGAGTTTTTCTCCGTTCCCAACGTCTCTCCTCCGATTCTTCAGTTGAAGAAAGTGGATGGGGGAGAAGCTGGAGAGAGGCGTGATGGTGACTATTTTGAACTTAAGGTCAAGATATGCAATGGGAAGGTTATACATGTGGTTGCATCGGTTAAAGGTTTCTTTGCCGTTGGGAAGCAGCTCTCTCATACTCATTCCATTGTTGATTTGCTTCAGAATGTTAGCAATGCTTTTGCCAAGGCATATGAGTCACTGATGAAAGCTTTCACTGACCGGAATAAGTTTGGCAACCTTCCGTATGGGTTACGAACAAACACGTGGCTTGTACCCTCTTCTGATTCTCTATCAACCTTCTCCCCTTTACCAACAGAGGATGAAAACTGGGGAGGGAACGGTGGGGGCCAGGGGAGGAATGGTGAACATGATCTTCGTCCCTGGGCGGCTGAGTTTTCTGTGTTAGCTACGCTTCCTTGCAAGACTGAGGAGGAGAGGGTTATTCGTGATAAGAAGGCTTTTCTGCTTCATAACCTGTTTGTTGATGCCTCTGTTCGAAGAGCTGTTAGAGCCATTTCCGACGTGATTGGTACTAATCAACGCACAAGTGGAACTAGTGACTTCCCTGCAGGCTCCATCCTTCTTGAAGATCGGGTTGGAGATTTGTCTATTATTGTAAAACGTGATGTAGCCGGCCTTGACCCGAATCCTAAAGGTGCATTTCAAAATGAAGCATTTCCTTTGTCATCCAAGGAACTTAGTGAAAGGAATCTGCTAAAGGGGATAACAGCTGATGAGAGTGTCATTGTTCACGATATTCGGGCTTTAAGCACAGTTATTGTAAGGCAATGTGGATATACAGCGGTGGTAAATGTGAAGGGCGAAACTAAGAAGGGAATGGCTGATTTACGTGATATTGTGATCGATGACTTACCGGATGGAGGAGCTAATGCTCTTAACCTTAACAGCTTAAGGGTTCAGCTTCACAGGTCCCATAGTGTCGGAAAATCTGGAGGGAACCAGCCTCCACAGTTTGATTTGGATGATTTAGAGTCTTTTAGATGTTTGGTACATGAACTAGTTAAAAACAACCTAACGAAGTTAGAAGAAGAAAGGGAATCTTCCGAAAGGTCCATCAGATGGGAGCTCGGTTCTTGCTGGGTTCAGCATCTACAAAAGAAAGAAACAGTAACGGAAGACGTTTGTGGGAAGCCTGCAATGAATGGTGAGACTGACCTTTCAGTCAAAGGTTTGGGGAAACAATTTAAAGTTCTAAAGATCAAAAATAAGAAATCAGAAAATACAAGTACCGTGAAGGAAATGGAAGAAAATATCAGTCTACGCGAGTTAGATGGGGAGGCTGAACTGAAGGAACTGGTTTCTGAAGAAGCTTTCTCTCGCCTACAAGAAAGTGGAACTGGTCTCCATTTAAAGTCAAAAGAAGAGCTTACCAAGATGGTATATGGATACTATGATGAAATTGCTTTGCCAAGGCTGGTAGCAGATTTTGGGTCCCTGGAGCTTTCTCCAGTTGATGGCCGCACAATGACAGACTTCATGCATATTAGAGGACTCCAAATGCGTTCTCTAGGACATGTGGCTAAACTTGCTGAGGACCTTCCTCACATACAGTCCCTCTGTATTCATGAGATGATTACGAGAACTTTCAAGCATCTTCTTAGGGCGGTTATTGCATCTATCAATAAGATGGCAGAGCTACCTGGGGCTATAGCTGCGTCATTAAATTTCATGCTTGGCCTCCATGGATTGGAAGGGAGTGATGGAATCTCCAGTGAAGAGTCTAGTCTCAGATTACAGTGGCTACAGAAATTTCTCTCCACTAGATTTGGTTGGATACAGAAAGATGAGTTCAAGCATTTGAATAAAGTTTCCATTCTCCGAGGACTTTGCCAGAAGGTTGGATTAGAACTAATTCCAAGAGACTATGACTTCGATTCTCCAAATCCCTTTAAGAGCTCTGATGTTTTTGGCTTGATACCTGTGTGCAAGCATGTGCTATGCGTTTCATCTGACGGAAGGACACTCTTGGAGTCATCAAAACTTGCTCTTGACAAAGGAAAACTAGATGATGCTGTCAACCATGGAACAAAGGCGTTAGCCAAGATGATTGCTGTCTGTGGACCTTATCATAAAAATACTGCTTGTGCGTACAGCCTTCTAGCCGTTGTACTGTACCACACTGGTGATTTTAATCAGGCAACTATATATCAGCAGAAGGCTCTGGATATAAATGAGAAAGAACTTGCTCTCGACCATCCCGACACTATGAAAAGCTATGGGGATCTTTCTGTATTTTATTATCGCCTTCAGCACATTGAGTTGGCACTGAAATATGTGAACCGTGCTTTGTTTCTTCTTCATTTCACTTGTGGGCTATCTCACCCGAATACTGCTGCCACATATATTAATGTGGCTATGATGGAAGAAGGAGTAGGGAACGTTCATCTAGCTCTAAGATACTTACATGAAGCTCTAAAGTGCAATAAAAGATTGCTAGGAGCTGACCATATTCAGACAGCAGCAAGCTATCATGCAATAGCTGTGGCTCTCTCTCTCATGGAAGCATATTCATTGAGTGTGCATCATGAACAGACTACACTTCAGATACTTACAAAAAAACTTGGATCAGATGACCTTCGTACACAGGATGCTGCTGCGTGGCTTGAATATTTTGAATCAAGAGCCATAGAGCAGCAGGAAGCAGCTCGAAATGGAATCCCAAAGCCTGATGCTTCCATTGCGAGCAAAGGCCACCTTAGTGTAGAAGATCTGATGGACTATATAAGTTCTGATCCAGATACTAAAGGAAGTGTTGTTCACAGAAAACAGCGGCGTCTCACTGTATTCCCGGTCAATGATAATGTTGCATCATCTGATGATGCAACCCACAGCGTTGCTTCACAGCATGGCATGGCTACATTGAACAACTTGGTAGAAACAAATGCCACCGAGAGTAGTAGGAACGAAGTAAATGATCCTAATGCAGTTGTTGATGAGGTCCACATAGAGACGGATGAAACTGTAGTACACAGGCCAAGTGTAGACAACCAAACTGTGGACGAGTCAGCTTTAGATGGGGGCTGGCAAGAGGCTTACTCAAAGGGGAGATCCGGAAATGGTGCTGGAAAGAAATTTAGACAAAGGCAGCCTTATCAGAGAATGTCGCTTAATAGAAATTTCAATGGGAGACAGGATGTTCATCAACAGTATATAGCTTCTCCCTTGCAGAAAGCGAGTCCGAGACCCTCACTCTCTAAGCCATCATCTCTTAGGGCTCTGAAGAATGGGGAGATAGATGTCAGTACAAAAACAATTAAGCCACAAATAAAGTCTCCTGGTTATGCTGCGGCGACCAGTACTACTTTGGCTTCAAAGTCACTCTCATACAAAGAGGTTGCTTTGGCACAACCAGGGTTTCAAGTTCATCAACTGGAGAAGAAAGCAAGTCTGATGCTGTAA
Protein:  
MAPRSSKGKSNRGKGEKKKREEKVLVPSLVDITVTTPYETQVILKGVSTDKIIDVKRLLASHVDTCHLTNYSLSHQVKGRRLSDSIQVVTLKPCVLRMIPEDYVEESQALTQVRRVLDIVACTTRFSSASKSSSNKLVAVGNGNPAPEGLDMVAIHPTPKLSQFYEFFSVPNVSPPILQLKKVDGGEAGERRDGDYFELKVKICNGKVIHVVASVKGFFAVGKQLSHTHSIVDLLQNVSNAFAKAYESLMKAFTDRNKFGNLPYGLRTNTWLVPSSDSLSTFSPLPTEDENWGGNGGGQGRNGEHDLRPWAAEFSVLATLPCKTEEERVIRDKKAFLLHNLFVDASVRRAVRAISDVIGTNQRTSGTSDFPAGSILLEDRVGDLSIIVKRDVAGLDPNPKGAFQNEAFPLSSKELSERNLLKGITADESVIVHDIRALSTVIVRQCGYTAVVNVKGETKKGMADLRDIVIDDLPDGGANALNLNSLRVQLHRSHSVGKSGGNQPPQFDLDDLESFRCLVHELVKNNLTKLEEERESSERSIRWELGSCWVQHLQKKETVTEDVCGKPAMNGETDLSVKGLGKQFKVLKIKNKKSENTSTVKEMEENISLRELDGEAELKELVSEEAFSRLQESGTGLHLKSKEELTKMVYGYYDEIALPRLVADFGSLELSPVDGRTMTDFMHIRGLQMRSLGHVAKLAEDLPHIQSLCIHEMITRTFKHLLRAVIASINKMAELPGAIAASLNFMLGLHGLEGSDGISSEESSLRLQWLQKFLSTRFGWIQKDEFKHLNKVSILRGLCQKVGLELIPRDYDFDSPNPFKSSDVFGLIPVCKHVLCVSSDGRTLLESSKLALDKGKLDDAVNHGTKALAKMIAVCGPYHKNTACAYSLLAVVLYHTGDFNQATIYQQKALDINEKELALDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGVGNVHLALRYLHEALKCNKRLLGADHIQTAASYHAIAVALSLMEAYSLSVHHEQTTLQILTKKLGSDDLRTQDAAAWLEYFESRAIEQQEAARNGIPKPDASIASKGHLSVEDLMDYISSDPDTKGSVVHRKQRRLTVFPVNDNVASSDDATHSVASQHGMATLNNLVETNATESSRNEVNDPNAVVDEVHIETDETVVHRPSVDNQTVDESALDGGWQEAYSKGRSGNGAGKKFRQRQPYQRMSLNRNFNGRQDVHQQYIASPLQKASPRPSLSKPSSLRALKNGEIDVSTKTIKPQIKSPGYAAATSTTLASKSLSYKEVALAQPGFQVHQLEKKASLML